PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN01701.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 319aa    MW: 35166.1 Da    PI: 7.6264
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN01701.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.87e-12132179355
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 + h ++Er RR++i +++  L  l+P +     kK++K+++L +A++Y+k+L+
  KHN01701.1 132 QDHIIAERMRREKISQKLIALSALIPDL-----KKMDKVSVLGEAIRYVKQLK 179
                 5699************************.....9*****************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.627129178IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.5E-16132195IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.5E-9133178IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.9E-15133193IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.29E-11134183No hitNo description
SMARTSM003531.0E-12135184IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    Send to blast
MGQSDIKVDD VNGTLASPHD VATALLEKNQ QSSFSTVESL SSAAESGLER PFKLPKIEQL  60
SQKTASSSTP SSYILSFDNT NPPPVTVESA SKPGTKVLNL EKVLPSKNEP RRVVTQQNKK  120
MGSFAGSSHH TQDHIIAERM RREKISQKLI ALSALIPDLK KMDKVSVLGE AIRYVKQLKE  180
QVKLLEEQSK RKNEESVVFA KKSQVFPADE DVSDTSSNSC EFGNSDDIST KATLSLPEVE  240
ARVSKKSVLI RILCEKEKAV LVNIFREIEK LHLSVVNSSA LSFGSSVLDT TIVAEMEDEF  300
NMGVKELARN LRVGLMQFM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003549988.10.0PREDICTED: transcription factor bHLH18-like
TrEMBLA0A0B2NX260.0A0A0B2NX26_GLYSO; Transcription factor bHLH25
STRINGGLYMA17G16730.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45534164
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.14e-55bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]